dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002470_3|CGC17
Gene ID: MGYG000002470_02187
Location and strand information: 628635 - 629912 (-)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.2901
Protein molecular weight: 47952.24
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC17
Gene ID: MGYG000002470_02188
Location and strand information: 630039 - 631166 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 7.8313
Protein molecular weight: 43135.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC17
Gene ID: MGYG000002470_02189
Location and strand information: 631224 - 632645 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1863
Protein molecular weight: 51974.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC17
Gene ID: MGYG000002470_02190
Location and strand information: 632642 - 633277 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_3|CGC17
Gene ID: MGYG000002470_02191
Location and strand information: 633521 - 635599 (+)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.4128
Protein molecular weight: 79961.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC17
Gene ID: MGYG000002470_02192
Location and strand information: 635636 - 636316 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_3|CGC17
Gene ID: MGYG000002470_02193
Location and strand information: 636573 - 638663 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_3|CGC17
Gene ID: MGYG000002470_02194
Location and strand information: 638692 - 641835 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002470_3|CGC17
Gene ID: MGYG000002470_02195
Location and strand information: 642125 - 643306 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_3|CGC17
Gene ID: MGYG000002470_02196
Location and strand information: 644098 - 647457 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_3|CGC17
Gene ID: MGYG000002470_02197
Location and strand information: 647485 - 649788 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_3|CGC17
Gene ID: MGYG000002470_02198
Location and strand information: 649962 - 651290 (+)
Family: null
Protein type: null
Protein description: Oligogalacturonate lyase

Gene clsuter ID: MGYG000002470_3|CGC17
Gene ID: MGYG000002470_02199
Location and strand information: 651302 - 653140 (+)
Family: PL11
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 5.1815
Protein molecular weight: 68799.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC17
Gene ID: MGYG000002470_02200
Location and strand information: 653241 - 656246 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.6638
Protein molecular weight: 114331.9
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC17
Gene ID: MGYG000002470_02201
Location and strand information: 656279 - 658105 (+)
Family: CBM2|CBM35|PL11|PL11_1
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 4.5664
Protein molecular weight: 67024.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC17
Gene ID: MGYG000002470_02202
Location and strand information: 658111 - 661467 (+)
Family: PL26
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.8708
Protein molecular weight: 127765.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC17
Gene ID: MGYG000002470_02203
Location and strand information: 661561 - 664767 (+)
Family: PL11_1|GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3506
Protein molecular weight: 119084.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC17
Gene ID: MGYG000002470_02204
Location and strand information: 664796 - 666202 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9713
Protein molecular weight: 53182.81
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002470_02187	CE12_e46
MGYG000002470_02188	GH105_e14\|3.2.1.172	pectin
MGYG000002470_02189	GH28_e52\|3.2.1.-	pectin
MGYG000002470_02191	GH42_e7
MGYG000002470_02199	PL11_e1
MGYG000002470_02200	GH2_e11\|3.2.1.31	beta-glucuronan
MGYG000002470_02201	PL11_e0\|CBM35_e56\|CBM2_e72\|4.2.2.23	pectin
MGYG000002470_02202	PL26_e0
MGYG000002470_02203	GH28_e36\|3.2.1.67\|3.2.1.-	pectin
MGYG000002470_02204	GH105_e35\|3.2.1.172	pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002470_02187	hypothetical protein	CAZyme	628635	629912	-	CE12
MGYG000002470_02188	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	630039	631166	-	GH105
MGYG000002470_02189	hypothetical protein	CAZyme	631224	632645	-	GH28
MGYG000002470_02190	hypothetical protein	null	632642	633277	-	DUF4450
MGYG000002470_02191	Beta-galactosidase	CAZyme	633521	635599	+	GH42
MGYG000002470_02192	hypothetical protein	null	635636	636316	+	Lipase_GDSL_2
MGYG000002470_02193	hypothetical protein	null	636573	638663	-	SusD-like_3\| SusD_RagB
MGYG000002470_02194	TonB-dependent receptor SusC	TC	638692	641835	-	1.B.14.6.1
MGYG000002470_02195	hypothetical protein	null	642125	643306	+	Arm-DNA-bind_5\| Phage_int_SAM_5\| Phage_integrase
MGYG000002470_02196	hypothetical protein	TC	644098	647457	+	1.B.14.6.1
MGYG000002470_02197	hypothetical protein	null	647485	649788	+	SusD-like_3\| SusD_RagB
MGYG000002470_02198	Oligogalacturonate lyase	null	649962	651290	+	Pectate_lyase22
MGYG000002470_02199	Rhamnogalacturonan endolyase YesW	CAZyme	651302	653140	+	PL11
MGYG000002470_02200	Beta-galactosidase	CAZyme	653241	656246	+	GH2
MGYG000002470_02201	Rhamnogalacturonan endolyase YesW	CAZyme	656279	658105	+	CBM2\| CBM35\| PL11\| PL11_1
MGYG000002470_02202	hypothetical protein	CAZyme	658111	661467	+	PL26
MGYG000002470_02203	hypothetical protein	CAZyme	661561	664767	+	PL11_1\| GH28
MGYG000002470_02204	hypothetical protein	CAZyme	664796	666202	+	GH105
Protein ID	Protein Name	Type	Start	End	Strand	Signature